Difference between revisions of "TSS:Hg 101221.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TUT7= | |TUT7= | ||
| − | |all_trans=ENST00000375960.6 | + | |all_trans=ENST00000375960.6:0 AL832026:0 CR933643:0 BX641077:0 BC111003:0 CR933644:11 AK055546:13 ENST00000277141.10:15 ENST00000375963.8:15 NM_001185059:15 NM_001185074:15 NM_001330718:15 NM_024617:15 AL832193:15 CR936608:15 BC032456:31 AK308352:83 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-56 |
|end=86354507 | |end=86354507 | ||
|end_of_center_position=86354466 | |end_of_center_position=86354466 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=PAPD6 | + | |gene_alias=PAPD6{{!}}TENT3B{{!}}ZCCHC6 |
| − | |gene_description= | + | |gene_description=terminal uridylyl transferase 7 |
|gene_id=79670 | |gene_id=79670 | ||
| − | |gene_name= | + | |gene_name=terminal uridylyl transferase 7 |
|gene_source=HGNC:25817 | |gene_source=HGNC:25817 | ||
| − | |gene_symbol= | + | |gene_symbol=TUT7 |
| − | |gene_synonyms=FLJ13409 KIAA1711 PAPD6 | + | |gene_synonyms=FLJ13409 KIAA1711 PAPD6 TENT3B |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25817 | |hgnc_mgi_id=HGNC:25817 | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_024617 |
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=86354424 | |start=86354424 | ||
|start_of_center_position=86354465 | |start_of_center_position=86354465 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375960.6 | + | |transcript_name=ENST00000375960.6 AL832026 CR933643 BX641077 BC111003 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101221.1 | |tss_id=hg_101221.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5VYS8 | + | |uniprot_id=Q5VYS8 |
}} | }} | ||
Revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86354465 |
|---|---|
| End of the center position in the TSS region: | 86354466 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375960.6 AL832026 CR933643 BX641077 BC111003 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000375960.6:0 AL832026:0 CR933643:0 BX641077:0 BC111003:0 CR933644:11 AK055546:13 ENST00000277141.10:15 ENST00000375963.8:15 NM_001185059:15 NM_001185074:15 NM_001330718:15 NM_024617:15 AL832193:15 CR936608:15 BC032456:31 AK308352:83 |
TATA-Box annotation
| Distance to TSS: | -56 |
|---|---|
| Nearest PromoterID: | NM_024617 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | terminal uridylyl transferase 7 |
| Gene Alias: | PAPD6|TENT3B|ZCCHC6 |
| Gene Description: | terminal uridylyl transferase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
