Difference between revisions of "TSS:Hg 101223.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=2397 |entrez_id=2619 |gc_percent=0.278607 |gene_alias=- |gene_description=growth arrest specific 1 |gene_name=GAS1 |gene_type=pr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF331849:-304 MA567426:-304 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=-304 |
| + | |distance_to_tss=2714 | ||
| + | |end=86944799 | ||
| + | |end_of_center_position=86944792 | ||
|entrez_id=2619 | |entrez_id=2619 | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=86944784 | ||
| + | |start_of_center_position=86944791 | ||
| + | |strand=- | ||
| + | |transcript_name=LF331849 MA567426 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101223.1 | |tss_id=hg_101223.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86944791 |
|---|---|
| End of the center position in the TSS region: | 86944792 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF331849 MA567426 |
|---|---|
| Distance: | -304 |
| Num_trans: | 2 |
| All_trans: | LF331849:-304 MA567426:-304 |
TATA-Box annotation
| Distance to TSS: | 2714 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | GAS1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
