Difference between revisions of "TSS:Hg 101243.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=809 |
|end=87554265 | |end=87554265 | ||
| − | |entrez_id= | + | |end_of_center_position=87554264 |
| + | |entrez_id=100506897 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=DAPK1 intronic transcript 1 |
| − | |gene_name=DAPK1 | + | |gene_name=DAPK1-IT1 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000236709 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_146781 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_146781 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.656160 |
|num_trans=0 | |num_trans=0 | ||
|species=human | |species=human | ||
|start=87554261 | |start=87554261 | ||
| + | |start_of_center_position=87554263 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(TAGTATAAAAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87554263 |
|---|---|
| End of the center position in the TSS region: | 87554264 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 809 |
|---|---|
| Nearest PromoterID: | NR_146781 |
| Entrez ID: | 100506897 |
| Nearest Unigene: | Hs.656160 |
| Nearest Refseq: | NR_146781 |
| Nearest Ensembl: | ENSG00000236709 |
| Gene Name: | DAPK1-IT1 |
| Gene Alias: | - |
| Gene Description: | DAPK1 intronic transcript 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TAGTATAAAAGC,-,0.00) |
