Difference between revisions of "TSS:Hg 101265.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-44220 |entrez_id=10927 |gc_percent=0.487562 |gene_alias=SPIN|TDRD24 |gene_description=spindlin 1 |gene_name=SPIN1 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TDRD24= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-44282 | ||
| + | |end=88344165 | ||
| + | |end_of_center_position=88344162 | ||
|entrez_id=10927 | |entrez_id=10927 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=SPIN | + | |gene_alias=SPIN{{!}}TDRD24 |
|gene_description=spindlin 1 | |gene_description=spindlin 1 | ||
|gene_name=SPIN1 | |gene_name=SPIN1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_006717 | |nearest_refseq=NM_006717 | ||
|nearest_unigene=Hs.146804 | |nearest_unigene=Hs.146804 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=88344158 | ||
| + | |start_of_center_position=88344161 | ||
| + | |strand=- | ||
| + | |tata_box=-35(GGTTTTATAAGA,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101265.1 | |tss_id=hg_101265.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 88344161 |
|---|---|
| End of the center position in the TSS region: | 88344162 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -44282 |
|---|---|
| Nearest PromoterID: | NM_006717 |
| Entrez ID: | 10927 |
| Nearest Unigene: | Hs.146804 |
| Nearest Refseq: | NM_006717 |
| Nearest Ensembl: | ENSG00000106723 |
| Gene Name: | SPIN1 |
| Gene Alias: | SPIN|TDRD24 |
| Gene Description: | spindlin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GGTTTTATAAGA,-,0.00) |
