Difference between revisions of "TSS:Hg 101288.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF331638:-334 MA567215:-334 LF331639:-421 MA567216:-421 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=-334 |
|distance_to_tss=-277 | |distance_to_tss=-277 | ||
|end=89310931 | |end=89310931 | ||
| + | |end_of_center_position=89310918 | ||
|entrez_id=1164 | |entrez_id=1164 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NM_001827 | |nearest_refseq=NM_001827 | ||
|nearest_unigene=Hs.83758 | |nearest_unigene=Hs.83758 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=89310904 | |start=89310904 | ||
| + | |start_of_center_position=89310917 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF331638 MA567215 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101288.1 | |tss_id=hg_101288.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89310917 |
|---|---|
| End of the center position in the TSS region: | 89310918 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF331638 MA567215 |
|---|---|
| Distance: | -334 |
| Num_trans: | 4 |
| All_trans: | LF331638:-334 MA567215:-334 LF331639:-421 MA567216:-421 |
TATA-Box annotation
| Distance to TSS: | -277 |
|---|---|
| Nearest PromoterID: | NM_001827 |
| Entrez ID: | 1164 |
| Nearest Unigene: | Hs.83758 |
| Nearest Refseq: | NM_001827 |
| Nearest Ensembl: | ENSG00000123975 |
| Gene Name: | CKS2 |
| Gene Alias: | CKSHS2 |
| Gene Description: | CDC28 protein kinase regulatory subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
