Difference between revisions of "TSS:Hg 101369.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=73906 | |distance_to_tss=73906 | ||
|end=91192974 | |end=91192974 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=91192967 | |start_of_center_position=91192967 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(CTTTTTATAGCG,+,0.00),45(CTTTTTATAAGA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91192967 |
|---|---|
| End of the center position in the TSS region: | 91192968 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 73906 |
|---|---|
| Nearest PromoterID: | NR_135306 |
| Entrez ID: | 100129347 |
| Nearest Unigene: | Hs.522287 |
| Nearest Refseq: | NR_135306 |
| Nearest Ensembl: | ENSG00000229694 |
| Gene Name: | LINC00484 |
| Gene Alias: | C9orf73 |
| Gene Description: | long intergenic non-protein coding RNA 484 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CTTTTTATAGCG,+,0.00),45(CTTTTTATAAGA,+,0.00) |
