Difference between revisions of "TSS:Hg 101403.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HSN1= | ||
| + | |LBC1= | ||
| + | |LCB1= | ||
| + | |SPT1= | ||
| + | |SPTI= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=69889 | ||
| + | |end=92045525 | ||
| + | |end_of_center_position=92045524 | ||
|entrez_id=10558 | |entrez_id=10558 | ||
|gc_percent=0.238806 | |gc_percent=0.238806 | ||
| − | |gene_alias=HSAN1 | + | |gene_alias=HSAN1{{!}}HSN1{{!}}LBC1{{!}}LCB1{{!}}SPT1{{!}}SPTI |
|gene_description=serine palmitoyltransferase long chain base subunit 1 | |gene_description=serine palmitoyltransferase long chain base subunit 1 | ||
|gene_name=SPTLC1 | |gene_name=SPTLC1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000090054 | |nearest_ensembl=ENSG00000090054 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368273 |
|nearest_refseq=NM_006415 | |nearest_refseq=NM_006415 | ||
|nearest_unigene=Hs.90458 | |nearest_unigene=Hs.90458 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=92045522 | ||
| + | |start_of_center_position=92045523 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101403.1 | |tss_id=hg_101403.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:39, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 92045523 |
|---|---|
| End of the center position in the TSS region: | 92045524 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 69889 |
|---|---|
| Nearest PromoterID: | NM_001368273 |
| Entrez ID: | 10558 |
| Nearest Unigene: | Hs.90458 |
| Nearest Refseq: | NM_006415 |
| Nearest Ensembl: | ENSG00000090054 |
| Gene Name: | SPTLC1 |
| Gene Alias: | HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI |
| Gene Description: | serine palmitoyltransferase long chain base subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.238806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
