Difference between revisions of "TSS:Hg 101411.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=50280 |entrez_id=100500918 |gc_percent=0.368159 |gene_alias=mir-3651 |gene_description=microRNA 3651 |gene_name=MIR3651 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=50280 | |distance_to_tss=50280 | ||
| + | |end=92242279 | ||
| + | |end_of_center_position=92242268 | ||
|entrez_id=100500918 | |entrez_id=100500918 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_037424 | |nearest_refseq=NR_037424 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=92242255 | ||
| + | |start_of_center_position=92242267 | ||
| + | |strand=- | ||
| + | |tata_box=-93(CCTTTTAAATTT,+,0.00),41(CACCATAAAGGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101411.1 | |tss_id=hg_101411.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92242267 |
|---|---|
| End of the center position in the TSS region: | 92242268 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 50280 |
|---|---|
| Nearest PromoterID: | NR_037424 |
| Entrez ID: | 100500918 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037424 |
| Nearest Ensembl: | ENSG00000281156 |
| Gene Name: | MIR3651 |
| Gene Alias: | mir-3651 |
| Gene Description: | microRNA 3651 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(CCTTTTAAATTT,+,0.00),41(CACCATAAAGGC,-,0.00) |
