Difference between revisions of "TSS:Hg 101415.1"
From referenceTSS
| Line 5: | Line 5: | ||
|IRS= | |IRS= | ||
|PRO0785= | |PRO0785= | ||
| − | |all_trans= | + | |all_trans=ENST00000490438.1:13 ENST00000447699.7:-17 AK301272:23 ENST00000375643.7:29 ENST00000443024.7:32 NM_001378586:32 NM_001378584:32 NM_001378574:32 NM_001378575:32 NM_002161:32 NM_001378583:32 NR_073446:32 NM_001378576:32 NM_001378579:32 NM_001378585:32 NM_013417:32 NM_001378580:32 NM_001378582:32 NM_001378578:32 NM_001378577:32 NM_001378569:32 NM_001378571:32 NM_001378572:32 NM_001378573:32 NM_001374299:32 NM_001374301:32 NM_001374300:32 ENST00000627121.3:34 BX647071:34 BX648567:34 BX537429:34 BX538109:34 BX537417:35 BX647430:39 AK308202:39 BX647236:41 U04953:44 AK293014:46 D28473:55 AB209234:64 ENST00000430417.1:88 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 14: | Line 14: | ||
|entrez_id=3376 | |entrez_id=3376 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=GRIDHH | + | |gene_alias=GRIDHH{{!}}IARS1{{!}}ILERS{{!}}ILRS{{!}}IRS{{!}}PRO0785 |
|gene_description=isoleucyl-tRNA synthetase | |gene_description=isoleucyl-tRNA synthetase | ||
|gene_id=3376 | |gene_id=3376 | ||
| − | |gene_name=isoleucyl-tRNA synthetase | + | |gene_name=isoleucyl-tRNA synthetase 1 |
|gene_source=HGNC:5330 | |gene_source=HGNC:5330 | ||
| − | |gene_symbol= | + | |gene_symbol=IARS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ILRS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5330 | |hgnc_mgi_id=HGNC:5330 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_002161 | |nearest_refseq=NM_002161 | ||
|nearest_unigene=Hs.445403 | |nearest_unigene=Hs.445403 | ||
| − | |num_trans= | + | |num_trans=41 |
|species=human | |species=human | ||
|start=92293728 | |start=92293728 | ||
|start_of_center_position=92293733 | |start_of_center_position=92293733 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000490438.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101415.1 | |tss_id=hg_101415.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92293733 |
|---|---|
| End of the center position in the TSS region: | 92293734 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000490438.1 |
|---|---|
| Distance: | 13 |
| Num_trans: | 41 |
| All_trans: | ENST00000490438.1:13 ENST00000447699.7:-17 AK301272:23 ENST00000375643.7:29 ENST00000443024.7:32 NM_001378586:32 NM_001378584:32 NM_001378574:32 NM_001378575:32 NM_002161:32 NM_001378583:32 NR_073446:32 NM_001378576:32 NM_001378579:32 NM_001378585:32 NM_013417:32 NM_001378580:32 NM_001378582:32 NM_001378578:32 NM_001378577:32 NM_001378569:32 NM_001378571:32 NM_001378572:32 NM_001378573:32 NM_001374299:32 NM_001374301:32 NM_001374300:32 ENST00000627121.3:34 BX647071:34 BX648567:34 BX537429:34 BX538109:34 BX537417:35 BX647430:39 AK308202:39 BX647236:41 U04953:44 AK293014:46 D28473:55 AB209234:64 ENST00000430417.1:88 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_013417 |
| Entrez ID: | 3376 |
| Nearest Unigene: | Hs.445403 |
| Nearest Refseq: | NM_002161 |
| Nearest Ensembl: | ENSG00000196305 |
| Gene Name: | isoleucyl-tRNA synthetase 1 |
| Gene Alias: | GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 |
| Gene Description: | isoleucyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
