Difference between revisions of "TSS:Hg 101435.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PLAP1= | |PLAP1= | ||
|SLRR1C= | |SLRR1C= | ||
| − | |all_trans=ENST00000375544.7:0 | + | |all_trans=ENST00000375544.7:0 NM_001193335:0 NM_017680:0 BC063114:0 BC022059:0 AY358329:5 AY029191:11 ENST00000651738.1:23 AK308107:26 LF209785:-40 MA445362:-40 ENST00000650794.1:121 AK172737:121 AK304501:128 ENST00000375543.2:147 AK027359:147 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=92482514 | |end=92482514 | ||
|end_of_center_position=92482507 | |end_of_center_position=92482507 | ||
|entrez_id=54829 | |entrez_id=54829 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=OS3 | + | |gene_alias=OS3{{!}}PLAP-1{{!}}PLAP1{{!}}SLRR1C |
|gene_description=asporin | |gene_description=asporin | ||
|gene_id=54829 | |gene_id=54829 | ||
| Line 18: | Line 18: | ||
|gene_source=HGNC:14872 | |gene_source=HGNC:14872 | ||
|gene_symbol=ASPN | |gene_symbol=ASPN | ||
| − | |gene_synonyms=FLJ20129 | + | |gene_synonyms=FLJ20129 PLAP-1 SLRR1C |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:14872 | |hgnc_mgi_id=HGNC:14872 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_017680 | |nearest_refseq=NM_017680 | ||
|nearest_unigene=Hs.435655 | |nearest_unigene=Hs.435655 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=92482499 | |start=92482499 | ||
|start_of_center_position=92482506 | |start_of_center_position=92482506 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375544.7 | + | |transcript_name=ENST00000375544.7 NM_001193335 NM_017680 BC063114 BC022059 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101435.1 | |tss_id=hg_101435.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q05CQ6 | + | |uniprot_id=Q05CQ6 Q6P528 Q9BXN1 |
}} | }} | ||
Revision as of 16:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92482506 |
|---|---|
| End of the center position in the TSS region: | 92482507 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375544.7 NM_001193335 NM_017680 BC063114 BC022059 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000375544.7:0 NM_001193335:0 NM_017680:0 BC063114:0 BC022059:0 AY358329:5 AY029191:11 ENST00000651738.1:23 AK308107:26 LF209785:-40 MA445362:-40 ENST00000650794.1:121 AK172737:121 AK304501:128 ENST00000375543.2:147 AK027359:147 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001193335 |
| Entrez ID: | 54829 |
| Nearest Unigene: | Hs.435655 |
| Nearest Refseq: | NM_017680 |
| Nearest Ensembl: | ENSG00000106819 |
| Gene Name: | asporin |
| Gene Alias: | OS3|PLAP-1|PLAP1|SLRR1C |
| Gene Description: | asporin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
