Difference between revisions of "TSS:Hg 101446.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-3090 |entrez_id=1842 |gc_percent=0.447761 |gene_alias=- |gene_description=extracellular matrix protein 2 |gene_name=ECM2 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000447622.1:-1 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=-1 | ||
|distance_to_tss=-3090 | |distance_to_tss=-3090 | ||
| + | |end=92539183 | ||
| + | |end_of_center_position=92539182 | ||
|entrez_id=1842 | |entrez_id=1842 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 9: | Line 14: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106823 | |nearest_ensembl=ENSG00000106823 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001197295 |
|nearest_refseq=NM_001393 | |nearest_refseq=NM_001393 | ||
|nearest_unigene=Hs.117060 | |nearest_unigene=Hs.117060 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=92539180 | ||
| + | |start_of_center_position=92539181 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000447622.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101446.1 | |tss_id=hg_101446.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92539181 |
|---|---|
| End of the center position in the TSS region: | 92539182 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000447622.1 |
|---|---|
| Distance: | -1 |
| Num_trans: | 1 |
| All_trans: | ENST00000447622.1:-1 |
TATA-Box annotation
| Distance to TSS: | -3090 |
|---|---|
| Nearest PromoterID: | NM_001197295 |
| Entrez ID: | 1842 |
| Nearest Unigene: | Hs.117060 |
| Nearest Refseq: | NM_001393 |
| Nearest Ensembl: | ENSG00000106823 |
| Gene Name: | ECM2 |
| Gene Alias: | - |
| Gene Description: | extracellular matrix protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
