Difference between revisions of "TSS:Hg 101450.1"
From referenceTSS
| Line 3: | Line 3: | ||
|IP5K= | |IP5K= | ||
|IPK1= | |IPK1= | ||
| − | |all_trans=AF351202:54 AK023225:70 | + | |all_trans=ENST00000287996.8:0 NM_022755:0 AF351202:54 AK023225:70 BC026154:-103 KJ894569:134 AF520811:137 LF383454:-160 MA619031:-160 |
|bA476B13.1= | |bA476B13.1= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-12 |
|end=92670162 | |end=92670162 | ||
|end_of_center_position=92670144 | |end_of_center_position=92670144 | ||
|entrez_id=64768 | |entrez_id=64768 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=C9orf12 | + | |gene_alias=C9orf12{{!}}INSP5K2{{!}}IP5K{{!}}IPK1{{!}}bA476B13.1 |
|gene_description=inositol-pentakisphosphate 2-kinase | |gene_description=inositol-pentakisphosphate 2-kinase | ||
|gene_id=64768 | |gene_id=64768 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_022755 | |nearest_refseq=NM_022755 | ||
|nearest_unigene=Hs.459896 | |nearest_unigene=Hs.459896 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=92670124 | |start=92670124 | ||
|start_of_center_position=92670143 | |start_of_center_position=92670143 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000287996.8 NM_022755 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101450.1 | |tss_id=hg_101450.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9H8X2 |
}} | }} | ||
Revision as of 16:40, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 92670143 |
|---|---|
| End of the center position in the TSS region: | 92670144 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000287996.8 NM_022755 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000287996.8:0 NM_022755:0 AF351202:54 AK023225:70 BC026154:-103 KJ894569:134 AF520811:137 LF383454:-160 MA619031:-160 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_022755 |
| Entrez ID: | 64768 |
| Nearest Unigene: | Hs.459896 |
| Nearest Refseq: | NM_022755 |
| Nearest Ensembl: | ENSG00000127080 |
| Gene Name: | inositol-pentakisphosphate 2-kinase |
| Gene Alias: | C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 |
| Gene Description: | inositol-pentakisphosphate 2-kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
