Difference between revisions of "TSS:Hg 101478.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NINJURIN= | |NINJURIN= | ||
| − | |all_trans=ENST00000470314.5:0 | + | |all_trans=ENST00000375446.5:0 ENST00000470314.5:0 NM_004148:0 BC004440:0 BC000298:0 U72661:0 U91512:0 BC019336:0 ENST00000461162.5:16 ENST00000490564.1:16 BT007164:18 KJ891705:18 KJ897247:18 KR711305:18 CU690562:18 BC048212:-27 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=93134261 | |end=93134261 | ||
|end_of_center_position=93134248 | |end_of_center_position=93134248 | ||
|entrez_id=4814 | |entrez_id=4814 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=NIN1 | + | |gene_alias=NIN1{{!}}NINJURIN |
|gene_description=ninjurin 1 | |gene_description=ninjurin 1 | ||
|gene_id=4814 | |gene_id=4814 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004148 | |nearest_refseq=NM_004148 | ||
|nearest_unigene=Hs.494457 | |nearest_unigene=Hs.494457 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=93134234 | |start=93134234 | ||
|start_of_center_position=93134247 | |start_of_center_position=93134247 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000470314.5 | + | |transcript_name=ENST00000375446.5 ENST00000470314.5 NM_004148 BC004440 BC000298 U72661 U91512 BC019336 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101478.1 | |tss_id=hg_101478.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q92982 |
}} | }} | ||
Revision as of 16:41, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93134247 |
|---|---|
| End of the center position in the TSS region: | 93134248 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375446.5 ENST00000470314.5 NM_004148 BC004440 BC000298 U72661 U91512 BC019336 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000375446.5:0 ENST00000470314.5:0 NM_004148:0 BC004440:0 BC000298:0 U72661:0 U91512:0 BC019336:0 ENST00000461162.5:16 ENST00000490564.1:16 BT007164:18 KJ891705:18 KJ897247:18 KR711305:18 CU690562:18 BC048212:-27 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_004148 |
| Entrez ID: | 4814 |
| Nearest Unigene: | Hs.494457 |
| Nearest Refseq: | NM_004148 |
| Nearest Ensembl: | ENSG00000131669 |
| Gene Name: | ninjurin 1 |
| Gene Alias: | NIN1|NINJURIN |
| Gene Description: | ninjurin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
