Difference between revisions of "TSS:Hg 101498.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=605 |entrez_id=23196 |gc_percent=0.676617 |gene_alias=C9orf10|OSSA |gene_description=family with sequence similarity 120A |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OSSA= | ||
| + | |all_trans=DQ579422:-372 BC160143:-401 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=-372 | ||
|distance_to_tss=605 | |distance_to_tss=605 | ||
| + | |end=93452308 | ||
| + | |end_of_center_position=93452301 | ||
|entrez_id=23196 | |entrez_id=23196 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=C9orf10 | + | |gene_alias=C9orf10{{!}}HBVPTPAP{{!}}OSSA |
|gene_description=family with sequence similarity 120A | |gene_description=family with sequence similarity 120A | ||
|gene_name=FAM120A | |gene_name=FAM120A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000048828 | |nearest_ensembl=ENSG00000048828 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286723 |
|nearest_refseq=NM_014612 | |nearest_refseq=NM_014612 | ||
|nearest_unigene=Hs.372003 | |nearest_unigene=Hs.372003 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=93452293 | ||
| + | |start_of_center_position=93452300 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ579422 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101498.1 | |tss_id=hg_101498.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:41, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 93452300 |
|---|---|
| End of the center position in the TSS region: | 93452301 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ579422 |
|---|---|
| Distance: | -372 |
| Num_trans: | 2 |
| All_trans: | DQ579422:-372 BC160143:-401 |
TATA-Box annotation
| Distance to TSS: | 605 |
|---|---|
| Nearest PromoterID: | NM_001286723 |
| Entrez ID: | 23196 |
| Nearest Unigene: | Hs.372003 |
| Nearest Refseq: | NM_014612 |
| Nearest Ensembl: | ENSG00000048828 |
| Gene Name: | FAM120A |
| Gene Alias: | C9orf10|HBVPTPAP|OSSA |
| Gene Description: | family with sequence similarity 120A |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
