Difference between revisions of "TSS:Hg 1015.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000375406. | + | |all_trans=ENST00000375406.2:0 NM_030812:0 AK057339:0 BC028909:0 U20582:4 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16 |
|end=17755388 | |end=17755388 | ||
|end_of_center_position=17755349 | |end_of_center_position=17755349 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_030812 | |nearest_refseq=NM_030812 | ||
|nearest_unigene=Hs.2149 | |nearest_unigene=Hs.2149 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=17755309 | |start=17755309 | ||
|start_of_center_position=17755348 | |start_of_center_position=17755348 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000375406. | + | |transcript_name=ENST00000375406.2 NM_030812 AK057339 BC028909 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_1015.1 | |tss_id=hg_1015.1 | ||
Revision as of 16:41, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17755348 |
|---|---|
| End of the center position in the TSS region: | 17755349 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000375406.2 NM_030812 AK057339 BC028909 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000375406.2:0 NM_030812:0 AK057339:0 BC028909:0 U20582:4 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_030812 |
| Entrez ID: | 81569 |
| Nearest Unigene: | Hs.2149 |
| Nearest Refseq: | NM_030812 |
| Nearest Ensembl: | ENSG00000117148 |
| Gene Name: | actin like 8 |
| Gene Alias: | CT57 |
| Gene Description: | actin like 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
