Difference between revisions of "TSS:Hg 101550.1"
From referenceTSS
| Line 2: | Line 2: | ||
|FAC= | |FAC= | ||
|FACC= | |FACC= | ||
| − | |all_trans=ENST00000433829.1:0 | + | |all_trans=ENST00000433829.1:0 ENST00000647882.1:0 ENST00000650176.1:-23 AK310599:-23 X66894:-315 ENST00000375305.6:-344 NM_001243743:-344 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 11: | Line 11: | ||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=FA3 | + | |gene_alias=FA3{{!}}FAC{{!}}FACC |
| − | |gene_description= | + | |gene_description=FA complementation group C |
|gene_id=2176 | |gene_id=2176 | ||
| − | |gene_name= | + | |gene_name=FA complementation group C |
|gene_source=HGNC:3584 | |gene_source=HGNC:3584 | ||
|gene_symbol=FANCC | |gene_symbol=FANCC | ||
| Line 29: | Line 29: | ||
|start_of_center_position=95316891 | |start_of_center_position=95316891 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000433829.1 | + | |transcript_name=ENST00000433829.1 ENST00000647882.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101550.1 | |tss_id=hg_101550.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B1ALR7 | + | |uniprot_id=A0A3B3IS26 B1ALR7 |
}} | }} | ||
Revision as of 16:42, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95316891 |
|---|---|
| End of the center position in the TSS region: | 95316892 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000433829.1 ENST00000647882.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000433829.1:0 ENST00000647882.1:0 ENST00000650176.1:-23 AK310599:-23 X66894:-315 ENST00000375305.6:-344 NM_001243743:-344 |
TATA-Box annotation
| Distance to TSS: | 363 |
|---|---|
| Nearest PromoterID: | NM_001243743 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | FA complementation group C |
| Gene Alias: | FA3|FAC|FACC |
| Gene Description: | FA complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
