Difference between revisions of "TSS:Hg 101559.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000549678 | + | |all_trans=ENST00000549678.1:-188 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038982 | |nearest_refseq=NR_038982 | ||
|nearest_unigene=Hs.661847 | |nearest_unigene=Hs.661847 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=95468996 | |start=95468996 | ||
|start_of_center_position=95468998 | |start_of_center_position=95468998 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000549678 | + | |transcript_name=ENST00000549678.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101559.1 | |tss_id=hg_101559.1 | ||
Revision as of 16:43, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95468998 |
|---|---|
| End of the center position in the TSS region: | 95468999 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000549678.1 |
|---|---|
| Distance: | -188 |
| Num_trans: | 1 |
| All_trans: | ENST00000549678.1:-188 |
TATA-Box annotation
| Distance to TSS: | 5390 |
|---|---|
| Nearest PromoterID: | NR_038982 |
| Entrez ID: | 100507346 |
| Nearest Unigene: | Hs.661847 |
| Nearest Refseq: | NR_038982 |
| Nearest Ensembl: | |
| Gene Name: | patched 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100507346 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
