Difference between revisions of "TSS:Hg 101592.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SDR12C2= | |SDR12C2= | ||
| − | |all_trans=BC034281:-8 KJ891397:12 KR710806:12 KR710807:12 KR710808:12 KR710809:12 DQ891812:12 DQ894995:12 CU689848:12 BT019371:14 CR541894:14 KU178130:14 KU178131:14 KU178132:14 KU178133:14 KU178134:14 | + | |all_trans=ENST00000650386.1:0 BC034281:-8 KJ891397:12 KR710806:12 KR710807:12 KR710808:12 KR710809:12 DQ891812:12 DQ894995:12 CU689848:12 ENST00000375262.4:14 ENST00000648332.1:14 ENST00000650005.1:14 ENST00000648146.1:14 ENST00000648799.1:-14 BT019371:14 CR541894:14 KU178130:14 KU178131:14 KU178132:14 KU178133:14 KU178134:14 U05659:-24 ENST00000375263.8:-48 ENST00000467499.6:-48 NM_000197:-48 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=53 |
|end=96302128 | |end=96302128 | ||
|end_of_center_position=96302123 | |end_of_center_position=96302123 | ||
|entrez_id=3293 | |entrez_id=3293 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=EDH17B3 | + | |gene_alias=EDH17B3{{!}}SDR12C2 |
|gene_description=hydroxysteroid 17-beta dehydrogenase 3 | |gene_description=hydroxysteroid 17-beta dehydrogenase 3 | ||
|gene_id=3293 | |gene_id=3293 | ||
| − | |gene_name=hydroxysteroid | + | |gene_name=hydroxysteroid 17-beta dehydrogenase 3 |
|gene_source=HGNC:5212 | |gene_source=HGNC:5212 | ||
|gene_symbol=HSD17B3 | |gene_symbol=HSD17B3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000197 | |nearest_refseq=NM_000197 | ||
|nearest_unigene=Hs.477 | |nearest_unigene=Hs.477 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=96302117 | |start=96302117 | ||
|start_of_center_position=96302122 | |start_of_center_position=96302122 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000650386.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101592.1 | |tss_id=hg_101592.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0S2Z3V7 |
}} | }} | ||
Revision as of 16:43, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 96302122 |
|---|---|
| End of the center position in the TSS region: | 96302123 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000650386.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000650386.1:0 BC034281:-8 KJ891397:12 KR710806:12 KR710807:12 KR710808:12 KR710809:12 DQ891812:12 DQ894995:12 CU689848:12 ENST00000375262.4:14 ENST00000648332.1:14 ENST00000650005.1:14 ENST00000648146.1:14 ENST00000648799.1:-14 BT019371:14 CR541894:14 KU178130:14 KU178131:14 KU178132:14 KU178133:14 KU178134:14 U05659:-24 ENST00000375263.8:-48 ENST00000467499.6:-48 NM_000197:-48 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_000197 |
| Entrez ID: | 3293 |
| Nearest Unigene: | Hs.477 |
| Nearest Refseq: | NM_000197 |
| Nearest Ensembl: | ENSG00000130948 |
| Gene Name: | hydroxysteroid 17-beta dehydrogenase 3 |
| Gene Alias: | EDH17B3|SDR12C2 |
| Gene Description: | hydroxysteroid 17-beta dehydrogenase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
