Difference between revisions of "TSS:Hg 101614.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000637864.1:0 NM_001355229:0 ENST00000652726.1:4 BC005058:4 ENST00000645073.1:-22 ENST00000647176.1:-60 NM_001355230:-67 NM_001355228:-67 ENST00000637811.1:-93 ENST00000650909.1:218 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=6 |
|end=97013615 | |end=97013615 | ||
|end_of_center_position=97013600 | |end_of_center_position=97013600 | ||
| Line 16: | Line 16: | ||
|gene_symbol=MFSD14C | |gene_symbol=MFSD14C | ||
|gene_synonyms=MGC12945 | |gene_synonyms=MGC12945 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:23672 | |hgnc_mgi_id=HGNC:23672 | ||
|nearest_ensembl=ENSG00000196312 | |nearest_ensembl=ENSG00000196312 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355229 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001355228 |
|nearest_unigene=Hs.610084 | |nearest_unigene=Hs.610084 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=97013583 | |start=97013583 | ||
|start_of_center_position=97013599 | |start_of_center_position=97013599 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000637864.1 NM_001355229 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101614.1 | |tss_id=hg_101614.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:44, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97013599 |
|---|---|
| End of the center position in the TSS region: | 97013600 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000637864.1 NM_001355229 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000637864.1:0 NM_001355229:0 ENST00000652726.1:4 BC005058:4 ENST00000645073.1:-22 ENST00000647176.1:-60 NM_001355230:-67 NM_001355228:-67 ENST00000637811.1:-93 ENST00000650909.1:218 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001355229 |
| Entrez ID: | 84278 |
| Nearest Unigene: | Hs.610084 |
| Nearest Refseq: | NM_001355228 |
| Nearest Ensembl: | ENSG00000196312 |
| Gene Name: | major facilitator superfamily domain containing 14C |
| Gene Alias: | HIATL2 |
| Gene Description: | major facilitator superfamily domain containing 14C |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
