Difference between revisions of "TSS:Hg 101631.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|XPAC= | |XPAC= | ||
| − | |all_trans= | + | |all_trans=BC014965:3 ENST00000375128.5:20 NM_000380:20 NM_001354975:-28 NR_027302:-28 NR_149094:-28 NR_149093:-28 NR_149092:-28 NR_149091:-28 LF383868:-28 MA619445:-28 D14533:42 ENST00000496104.1:65 ENST00000462523.5:67 KJ892389:68 BT019518:68 DQ893624:68 DQ895423:68 AB590398:68 KC899693:68 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 10: | Line 10: | ||
|entrez_id=7507 | |entrez_id=7507 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=XP1 | + | |gene_alias=XP1{{!}}XPAC |
| − | |gene_description= | + | |gene_description=XPA, DNA damage recognition and repair factor |
|gene_id=7507 | |gene_id=7507 | ||
| − | |gene_name= | + | |gene_name=XPA, DNA damage recognition and repair factor |
|gene_source=HGNC:12814 | |gene_source=HGNC:12814 | ||
|gene_symbol=XPA | |gene_symbol=XPA | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000380 | |nearest_refseq=NM_000380 | ||
|nearest_unigene=Hs.654364 | |nearest_unigene=Hs.654364 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=97697359 | |start=97697359 | ||
|start_of_center_position=97697370 | |start_of_center_position=97697370 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC014965 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101631.1 | |tss_id=hg_101631.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:44, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97697370 |
|---|---|
| End of the center position in the TSS region: | 97697371 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC014965 |
|---|---|
| Distance: | 3 |
| Num_trans: | 20 |
| All_trans: | BC014965:3 ENST00000375128.5:20 NM_000380:20 NM_001354975:-28 NR_027302:-28 NR_149094:-28 NR_149093:-28 NR_149092:-28 NR_149091:-28 LF383868:-28 MA619445:-28 D14533:42 ENST00000496104.1:65 ENST00000462523.5:67 KJ892389:68 BT019518:68 DQ893624:68 DQ895423:68 AB590398:68 KC899693:68 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NR_027302 |
| Entrez ID: | 7507 |
| Nearest Unigene: | Hs.654364 |
| Nearest Refseq: | NM_000380 |
| Nearest Ensembl: | ENSG00000136936 |
| Gene Name: | XPA, DNA damage recognition and repair factor |
| Gene Alias: | XP1|XPAC |
| Gene Description: | XPA, DNA damage recognition and repair factor |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
