Difference between revisions of "TSS:Hg 101654.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=1526 |entrez_id=10541 |gc_percent=0.800995 |gene_alias=APRIL|PHAPI2|SSP29 |gene_description=acidic nuclear phosphoprotein 32 fa...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PHAPI2= | ||
| + | |SSP29= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1392 | ||
| + | |end=97984740 | ||
| + | |end_of_center_position=97984733 | ||
|entrez_id=10541 | |entrez_id=10541 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=APRIL | + | |gene_alias=APRIL{{!}}PHAPI2{{!}}SSP29 |
|gene_description=acidic nuclear phosphoprotein 32 family member B | |gene_description=acidic nuclear phosphoprotein 32 family member B | ||
|gene_name=ANP32B | |gene_name=ANP32B | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_006401 | |nearest_refseq=NM_006401 | ||
|nearest_unigene=Hs.730654 | |nearest_unigene=Hs.730654 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=97984725 | ||
| + | |start_of_center_position=97984732 | ||
| + | |strand=- | ||
| + | |tata_box=-80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101654.1 | |tss_id=hg_101654.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97984732 |
|---|---|
| End of the center position in the TSS region: | 97984733 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1392 |
|---|---|
| Nearest PromoterID: | NM_006401 |
| Entrez ID: | 10541 |
| Nearest Unigene: | Hs.730654 |
| Nearest Refseq: | NM_006401 |
| Nearest Ensembl: | ENSG00000136938 |
| Gene Name: | ANP32B |
| Gene Alias: | APRIL|PHAPI2|SSP29 |
| Gene Description: | acidic nuclear phosphoprotein 32 family member B |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00) |
