Difference between revisions of "TSS:Hg 101711.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=-215628 | |distance_to_tss=-215628 | ||
| + | |end=99590892 | ||
| + | |end_of_center_position=99590886 | ||
|entrez_id=100996569 | |entrez_id=100996569 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=non-protein coding RNA, associated with MAP kinase pathway and growth arrest |
|gene_name=NAMA | |gene_name=NAMA | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_102270 | |nearest_refseq=NR_102270 | ||
|nearest_unigene=Hs.745280 | |nearest_unigene=Hs.745280 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=99590878 | ||
| + | |start_of_center_position=99590885 | ||
| + | |strand=- | ||
| + | |tata_box=-35(CTGCCTTAAAGG,-,0.00),-34(TGCCTTAAAGGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101711.1 | |tss_id=hg_101711.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:46, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 99590885 |
|---|---|
| End of the center position in the TSS region: | 99590886 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -215628 |
|---|---|
| Nearest PromoterID: | NR_102271 |
| Entrez ID: | 100996569 |
| Nearest Unigene: | Hs.745280 |
| Nearest Refseq: | NR_102270 |
| Nearest Ensembl: | ENSG00000271086 |
| Gene Name: | NAMA |
| Gene Alias: | - |
| Gene Description: | non-protein coding RNA, associated with MAP kinase pathway and growth arrest |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTGCCTTAAAGG,-,0.00),-34(TGCCTTAAAGGC,-,0.00) |
