Difference between revisions of "TSS:Hg 101720.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000427039.1:77 NR_109802 | + | |all_trans=ENST00000652827.1:45 ENST00000427039.1:77 NR_109802:77 AK057451:77 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=45 |
|distance_to_tss=-80 | |distance_to_tss=-80 | ||
|end=99819972 | |end=99819972 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=99819968 | |start_of_center_position=99819968 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000652827.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101720.1 | |tss_id=hg_101720.1 | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 99819968 |
|---|---|
| End of the center position in the TSS region: | 99819969 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000652827.1 |
|---|---|
| Distance: | 45 |
| Num_trans: | 4 |
| All_trans: | ENST00000652827.1:45 ENST00000427039.1:77 NR_109802:77 AK057451:77 |
TATA-Box annotation
| Distance to TSS: | -80 |
|---|---|
| Nearest PromoterID: | NR_109802 |
| Entrez ID: | 101928438 |
| Nearest Unigene: | Hs.637767 |
| Nearest Refseq: | NR_109802 |
| Nearest Ensembl: | ENSG00000237461 |
| Gene Name: | uncharacterized LOC101928438 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928438 |
| Gene Type: | ncRNA |
| CpG%: | 0.155 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
