Difference between revisions of "TSS:Hg 101772.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-21746 |entrez_id=414319 |gc_percent=0.567164 |gene_alias=C9orf107|bA785H23.1 |gene_description=long intergenic non-protein cod...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |bA785H23.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=NA | ||
|distance_to_tss=-21746 | |distance_to_tss=-21746 | ||
| + | |end=102497901 | ||
| + | |end_of_center_position=102497891 | ||
|entrez_id=414319 | |entrez_id=414319 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=C9orf107 | + | |gene_alias=C9orf107{{!}}bA785H23.1 |
|gene_description=long intergenic non-protein coding RNA 587 | |gene_description=long intergenic non-protein coding RNA 587 | ||
|gene_name=LINC00587 | |gene_name=LINC00587 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_103830 | |nearest_refseq=NR_103830 | ||
|nearest_unigene=Hs.385790 | |nearest_unigene=Hs.385790 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=102497880 | ||
| + | |start_of_center_position=102497890 | ||
| + | |strand=- | ||
| + | |tata_box=-92(GGCTCTAAATGA,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101772.1 | |tss_id=hg_101772.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102497890 |
|---|---|
| End of the center position in the TSS region: | 102497891 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -21746 |
|---|---|
| Nearest PromoterID: | NR_103830 |
| Entrez ID: | 414319 |
| Nearest Unigene: | Hs.385790 |
| Nearest Refseq: | NR_103830 |
| Nearest Ensembl: | ENSG00000204250 |
| Gene Name: | LINC00587 |
| Gene Alias: | C9orf107|bA785H23.1 |
| Gene Description: | long intergenic non-protein coding RNA 587 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -92(GGCTCTAAATGA,-,0.00) |
