Difference between revisions of "TSS:Hg 101846.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GKLF= | |GKLF= | ||
| − | |all_trans= | + | |all_trans=ENST00000374672.5:0 ENST00000610832.1:0 NM_001314052:0 NM_004235:0 U70663:109 AF022184:199 AF105036:281 ENST00000493306.1:318 HF546201:354 HF546202:354 HF546213:354 AK313489:446 LF211949:-448 MA447526:-448 BC029923:470 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=107489776 | |end=107489776 | ||
|end_of_center_position=107489766 | |end_of_center_position=107489766 | ||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=EZF | + | |gene_alias=EZF{{!}}GKLF |
|gene_description=Kruppel like factor 4 | |gene_description=Kruppel like factor 4 | ||
|gene_id=9314 | |gene_id=9314 | ||
| − | |gene_name=Kruppel | + | |gene_name=Kruppel like factor 4 |
|gene_source=HGNC:6348 | |gene_source=HGNC:6348 | ||
|gene_symbol=KLF4 | |gene_symbol=KLF4 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=107489754 | |start=107489754 | ||
|start_of_center_position=107489765 | |start_of_center_position=107489765 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000610832.1 | + | |transcript_name=ENST00000374672.5 ENST00000610832.1 NM_001314052 NM_004235 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101846.1 | |tss_id=hg_101846.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A087X0S4 | + | |uniprot_id=A0A087X0S4 O43474 |
}} | }} | ||
Revision as of 16:49, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 107489765 |
|---|---|
| End of the center position in the TSS region: | 107489766 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374672.5 ENST00000610832.1 NM_001314052 NM_004235 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000374672.5:0 ENST00000610832.1:0 NM_001314052:0 NM_004235:0 U70663:109 AF022184:199 AF105036:281 ENST00000493306.1:318 HF546201:354 HF546202:354 HF546213:354 AK313489:446 LF211949:-448 MA447526:-448 BC029923:470 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_004235 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | Kruppel like factor 4 |
| Gene Alias: | EZF|GKLF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
