Difference between revisions of "TSS:Hg 101848.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-148004 |entrez_id=9314 |gc_percent=0.681592 |gene_alias=EZF|GKLF |gene_description=Kruppel like factor 4 |gene_name=KLF4 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GKLF= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-147955 | ||
| + | |end=107637726 | ||
| + | |end_of_center_position=107637725 | ||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=EZF | + | |gene_alias=EZF{{!}}GKLF |
|gene_description=Kruppel like factor 4 | |gene_description=Kruppel like factor 4 | ||
|gene_name=KLF4 | |gene_name=KLF4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136826 | |nearest_ensembl=ENSG00000136826 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001314052 |
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=107637722 | ||
| + | |start_of_center_position=107637724 | ||
| + | |strand=- | ||
| + | |tata_box=-35(GCATATTTAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101848.1 | |tss_id=hg_101848.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:49, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 107637724 |
|---|---|
| End of the center position in the TSS region: | 107637725 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -147955 |
|---|---|
| Nearest PromoterID: | NM_001314052 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | KLF4 |
| Gene Alias: | EZF|GKLF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GCATATTTAAGG,-,0.00) |
