Difference between revisions of "TSS:Hg 101861.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=12873 |entrez_id=10880 |gc_percent=0.532338 |gene_alias=Tact1 |gene_description=actin like 7B |gene_name=ACTL7B |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=12864 | ||
| + | |end=108843128 | ||
| + | |end_of_center_position=108843122 | ||
|entrez_id=10880 | |entrez_id=10880 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_006686 | |nearest_refseq=NM_006686 | ||
|nearest_unigene=Hs.534390 | |nearest_unigene=Hs.534390 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=108843115 | ||
| + | |start_of_center_position=108843121 | ||
| + | |strand=- | ||
| + | |tata_box=-36(CAGCTTAAAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101861.1 | |tss_id=hg_101861.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:49, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 108843121 |
|---|---|
| End of the center position in the TSS region: | 108843122 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 12864 |
|---|---|
| Nearest PromoterID: | NM_006686 |
| Entrez ID: | 10880 |
| Nearest Unigene: | Hs.534390 |
| Nearest Refseq: | NM_006686 |
| Nearest Ensembl: | ENSG00000148156 |
| Gene Name: | ACTL7B |
| Gene Alias: | Tact1 |
| Gene Description: | actin like 7B |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(CAGCTTAAAAGC,-,0.00) |
