Difference between revisions of "TSS:Hg 101862.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK313871:0 | + | |all_trans=ENST00000374667.5:0 NM_006686:0 AK313871:0 BC033789:6 HM005666:-6 JF432142:49 KJ898304:49 CU689742:49 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=108855989 | |end=108855989 | ||
|end_of_center_position=108855984 | |end_of_center_position=108855984 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_006686 | |nearest_refseq=NM_006686 | ||
|nearest_unigene=Hs.534390 | |nearest_unigene=Hs.534390 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=108855978 | |start=108855978 | ||
|start_of_center_position=108855983 | |start_of_center_position=108855983 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK313871 | + | |transcript_name=ENST00000374667.5 NM_006686 AK313871 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101862.1 | |tss_id=hg_101862.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A140VKC6 Q9Y614 |
}} | }} | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 108855983 |
|---|---|
| End of the center position in the TSS region: | 108855984 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000374667.5 NM_006686 AK313871 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000374667.5:0 NM_006686:0 AK313871:0 BC033789:6 HM005666:-6 JF432142:49 KJ898304:49 CU689742:49 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_006686 |
| Entrez ID: | 10880 |
| Nearest Unigene: | Hs.534390 |
| Nearest Refseq: | NM_006686 |
| Nearest Ensembl: | ENSG00000148156 |
| Gene Name: | actin like 7B |
| Gene Alias: | Tact1 |
| Gene Description: | actin like 7B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
