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Difference between revisions of "TSS:Hg 101869.1"

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Line 5: Line 5:
 
|IKI3=
 
|IKI3=
 
|TOT1=
 
|TOT1=
−
|all_trans=ENST00000374647.9:0 uc004bdm.5:0 AF153419:0 AB210033:0 AK001641:0 AK225798:0 AF044195:0 AK289962:0 AK304742:87 ENST00000537196.1:108 uc010mtq.4:108 CR749385:108 BC033094:167 NM_003640:-191 NM_001318360:-191
+
|all_trans=ENST00000675765.1:0 ENST00000675078.1:0 ENST00000374647.10:0 ENST00000675748.1:0 ENST00000676044.1:0 ENST00000675979.1:0 ENST00000675325.1:0 ENST00000495759.6:0 ENST00000675893.1:0 ENST00000675943.1:0 ENST00000675535.1:0 ENST00000674890.1:0 ENST00000675233.1:0 ENST00000676086.1:0 ENST00000674836.1:0 ENST00000675406.1:0 ENST00000675215.1:0 ENST00000675602.1:0 ENST00000674938.1:0 ENST00000676429.1:0 ENST00000674704.1:0 ENST00000676237.1:0 ENST00000675825.1:0 ENST00000676424.1:0 ENST00000675647.1:0 ENST00000675877.1:0 ENST00000675400.1:0 ENST00000675052.1:0 ENST00000674535.1:0 ENST00000675566.1:0 ENST00000675507.1:0 ENST00000675727.1:0 NM_003640:0 NM_001330749:0 NM_001318360:0 AF153419:0 AB210033:0 AK001641:0 AK225798:0 AF044195:0 AK289962:0 ENST00000675938.1:-3 ENST00000676121.1:-4 LF206472:-9 MA442049:-9 AK304742:87 ENST00000537196.1:108 CR749385:108 ENST00000676416.1:118 BC033094:167 ENST00000674948.1:-187
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.095
 
|cpg_percent=0.095
 
|distance=0
 
|distance=0
−
|distance_to_tss=231
+
|distance_to_tss=23
 
|end=108934141
 
|end=108934141
 
|end_of_center_position=108934101
 
|end_of_center_position=108934101
 
|entrez_id=8518
 
|entrez_id=8518
 
|gc_percent=0.671642
 
|gc_percent=0.671642
−
|gene_alias=DYS
+
|gene_alias=DYS{{!}}FD{{!}}IKAP{{!}}IKBKAP{{!}}IKI3{{!}}TOT1
−
|gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein"
+
|gene_description=elongator complex protein 1
 
|gene_id=8518
 
|gene_id=8518
−
|gene_name="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein"
+
|gene_name=elongator acetyltransferase complex subunit 1
 
|gene_source=HGNC:5959
 
|gene_source=HGNC:5959
−
|gene_symbol=IKBKAP
+
|gene_symbol=ELP1
−
|gene_synonyms=ELP1 IKAP IKI3 TOT1
+
|gene_synonyms=IKAP IKI3 TOT1
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:5959
 
|hgnc_mgi_id=HGNC:5959
Line 27: Line 27:
 
|nearest_refseq=NM_003640
 
|nearest_refseq=NM_003640
 
|nearest_unigene=Hs.494738
 
|nearest_unigene=Hs.494738
−
|num_trans=15
+
|num_trans=51
 
|species=human
 
|species=human
 
|start=108934060
 
|start=108934060
 
|start_of_center_position=108934100
 
|start_of_center_position=108934100
 
|strand=-
 
|strand=-
−
|transcript_name=ENST00000374647.9 uc004bdm.5 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962
+
|transcript_name=ENST00000675765.1 ENST00000675078.1 ENST00000374647.10 ENST00000675748.1 ENST00000676044.1 ENST00000675979.1 ENST00000675325.1 ENST00000495759.6 ENST00000675893.1 ENST00000675943.1 ENST00000675535.1 ENST00000674890.1 ENST00000675233.1 ENST00000676086.1 ENST00000674836.1 ENST00000675406.1 ENST00000675215.1 ENST00000675602.1 ENST00000674938.1 ENST00000676429.1 ENST00000674704.1 ENST00000676237.1 ENST00000675825.1 ENST00000676424.1 ENST00000675647.1 ENST00000675877.1 ENST00000675400.1 ENST00000675052.1 ENST00000674535.1 ENST00000675566.1 ENST00000675507.1 ENST00000675727.1 NM_003640 NM_001330749 NM_001318360 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_101869.1
 
|tss_id=hg_101869.1
 
|tss_score=1
 
|tss_score=1
−
|uniprot_id=O95163 Q4LE38
+
|uniprot_id=F5H2T0 H0YDF3 O95163 Q4LE38 Q8N516
 
}}
 
}}

Revision as of 16:50, 15 June 2021

Basic information about the TSS

TSS ID:hg_101869.1
Species:human
Chr:chr9
TSS Classification:yes
Start:108934060
End:108934141
Strand:-
TSS Score:1
Start of the center position in the TSS region:108934100
End of the center position in the TSS region:108934101



Gene and protein annotation

Transcript_name:ENST00000675765.1 ENST00000675078.1 ENST00000374647.10 ENST00000675748.1 ENST00000676044.1 ENST00000675979.1 ENST00000675325.1 ENST00000495759.6 ENST00000675893.1 ENST00000675943.1 ENST00000675535.1 ENST00000674890.1 ENST00000675233.1 ENST00000676086.1 ENST00000674836.1 ENST00000675406.1 ENST00000675215.1 ENST00000675602.1 ENST00000674938.1 ENST00000676429.1 ENST00000674704.1 ENST00000676237.1 ENST00000675825.1 ENST00000676424.1 ENST00000675647.1 ENST00000675877.1 ENST00000675400.1 ENST00000675052.1 ENST00000674535.1 ENST00000675566.1 ENST00000675507.1 ENST00000675727.1 NM_003640 NM_001330749 NM_001318360 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962
Distance:0
GeneID:8518
HGNC/MGI_ID:HGNC:5959
UniProt_ID:F5H2T0 H0YDF3 O95163 Q4LE38 Q8N516
Gene_name:elongator acetyltransferase complex subunit 1
Gene_symbol:ELP1
Gene_synonyms:IKAP IKI3 TOT1
Gene_source:HGNC:5959



Transcript annotation

Transcript_name:ENST00000675765.1 ENST00000675078.1 ENST00000374647.10 ENST00000675748.1 ENST00000676044.1 ENST00000675979.1 ENST00000675325.1 ENST00000495759.6 ENST00000675893.1 ENST00000675943.1 ENST00000675535.1 ENST00000674890.1 ENST00000675233.1 ENST00000676086.1 ENST00000674836.1 ENST00000675406.1 ENST00000675215.1 ENST00000675602.1 ENST00000674938.1 ENST00000676429.1 ENST00000674704.1 ENST00000676237.1 ENST00000675825.1 ENST00000676424.1 ENST00000675647.1 ENST00000675877.1 ENST00000675400.1 ENST00000675052.1 ENST00000674535.1 ENST00000675566.1 ENST00000675507.1 ENST00000675727.1 NM_003640 NM_001330749 NM_001318360 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962
Distance:0
Num_trans:51
All_trans:ENST00000675765.1:0 ENST00000675078.1:0 ENST00000374647.10:0 ENST00000675748.1:0 ENST00000676044.1:0 ENST00000675979.1:0 ENST00000675325.1:0 ENST00000495759.6:0 ENST00000675893.1:0 ENST00000675943.1:0 ENST00000675535.1:0 ENST00000674890.1:0 ENST00000675233.1:0 ENST00000676086.1:0 ENST00000674836.1:0 ENST00000675406.1:0 ENST00000675215.1:0 ENST00000675602.1:0 ENST00000674938.1:0 ENST00000676429.1:0 ENST00000674704.1:0 ENST00000676237.1:0 ENST00000675825.1:0 ENST00000676424.1:0 ENST00000675647.1:0 ENST00000675877.1:0 ENST00000675400.1:0 ENST00000675052.1:0 ENST00000674535.1:0 ENST00000675566.1:0 ENST00000675507.1:0 ENST00000675727.1:0 NM_003640:0 NM_001330749:0 NM_001318360:0 AF153419:0 AB210033:0 AK001641:0 AK225798:0 AF044195:0 AK289962:0 ENST00000675938.1:-3 ENST00000676121.1:-4 LF206472:-9 MA442049:-9 AK304742:87 ENST00000537196.1:108 CR749385:108 ENST00000676416.1:118 BC033094:167 ENST00000674948.1:-187



TATA-Box annotation

Distance to TSS:23
Nearest PromoterID:NM_003640
Entrez ID:8518
Nearest Unigene:Hs.494738
Nearest Refseq:NM_003640
Nearest Ensembl:ENSG00000070061
Gene Name:elongator acetyltransferase complex subunit 1
Gene Alias:DYS|FD|IKAP|IKBKAP|IKI3|TOT1
Gene Description:elongator complex protein 1
Gene Type:protein-coding
CpG%:0.095
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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