Difference between revisions of "TSS:Hg 101884.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=65371 | |distance_to_tss=65371 | ||
|end=109255599 | |end=109255599 | ||
| Line 9: | Line 9: | ||
|entrez_id=54566 | |entrez_id=54566 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=CG1 | + | |gene_alias=CG1{{!}}EHM2 |
|gene_description=erythrocyte membrane protein band 4.1 like 4B | |gene_description=erythrocyte membrane protein band 4.1 like 4B | ||
|gene_name=EPB41L4B | |gene_name=EPB41L4B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000095203 | |nearest_ensembl=ENSG00000095203 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019114 |
|nearest_refseq=NM_018424 | |nearest_refseq=NM_018424 | ||
|nearest_unigene=Hs.591901 | |nearest_unigene=Hs.591901 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=109255593 | |start_of_center_position=109255593 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109255593 |
|---|---|
| End of the center position in the TSS region: | 109255594 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 65371 |
|---|---|
| Nearest PromoterID: | NM_019114 |
| Entrez ID: | 54566 |
| Nearest Unigene: | Hs.591901 |
| Nearest Refseq: | NM_018424 |
| Nearest Ensembl: | ENSG00000095203 |
| Gene Name: | EPB41L4B |
| Gene Alias: | CG1|EHM2 |
| Gene Description: | erythrocyte membrane protein band 4.1 like 4B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00) |
