Difference between revisions of "TSS:Hg 10189.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GLUT5= | |GLUT5= | ||
| − | |all_trans=AK300091:0 KJ892149:2 KJ892150:2 CU674838:2 DQ892291:3 DQ895491:3 AK289849:-33 BC001692:-36 BC001820:-36 AK295785:-45 ENST00000377414.7 | + | |all_trans=AK300091:0 KJ892149:2 KJ892150:2 CU674838:2 DQ892291:3 DQ895491:3 AK289849:-33 BC001692:-36 BC001820:-36 AK295785:-45 ENST00000377414.7:-53 BC035878:-53 M55531:-60 AK290398:-67 ENST00000377424.9:-84 NM_003039:-84 NM_001328621:-84 NM_001328620:-84 NM_001135585:-84 AK294368:-101 HM005394:-277 ENST00000473209.1:-300 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=90 |
|end=9069551 | |end=9069551 | ||
|end_of_center_position=9069546 | |end_of_center_position=9069546 | ||
|entrez_id=6518 | |entrez_id=6518 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=GLUT-5 | + | |gene_alias=GLUT-5{{!}}GLUT5 |
|gene_description=solute carrier family 2 member 5 | |gene_description=solute carrier family 2 member 5 | ||
|gene_id=6518 | |gene_id=6518 | ||
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|hgnc_mgi_id=HGNC:11010 | |hgnc_mgi_id=HGNC:11010 | ||
|nearest_ensembl=ENSG00000142583 | |nearest_ensembl=ENSG00000142583 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001328621 |
|nearest_refseq=NM_003039 | |nearest_refseq=NM_003039 | ||
|nearest_unigene=Hs.530003 | |nearest_unigene=Hs.530003 | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9069545 |
|---|---|
| End of the center position in the TSS region: | 9069546 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK300091 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | AK300091:0 KJ892149:2 KJ892150:2 CU674838:2 DQ892291:3 DQ895491:3 AK289849:-33 BC001692:-36 BC001820:-36 AK295785:-45 ENST00000377414.7:-53 BC035878:-53 M55531:-60 AK290398:-67 ENST00000377424.9:-84 NM_003039:-84 NM_001328621:-84 NM_001328620:-84 NM_001135585:-84 AK294368:-101 HM005394:-277 ENST00000473209.1:-300 |
TATA-Box annotation
| Distance to TSS: | 90 |
|---|---|
| Nearest PromoterID: | NM_001328621 |
| Entrez ID: | 6518 |
| Nearest Unigene: | Hs.530003 |
| Nearest Refseq: | NM_003039 |
| Nearest Ensembl: | ENSG00000142583 |
| Gene Name: | solute carrier family 2 member 5 |
| Gene Alias: | GLUT-5|GLUT5 |
| Gene Description: | solute carrier family 2 member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
