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Difference between revisions of "TSS:Hg 101959.1"

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Line 5: Line 5:
 
|Mrec1.3=
 
|Mrec1.3=
 
|VZG1=
 
|VZG1=
|all_trans=ENST00000541779.5:74 uc064vao.1:74 BC073167:74
+
|all_trans=ENST00000541779.5:74 BC073167:74 NM_001351420:-488
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=74
 
|distance=74
|distance_to_tss=1799
+
|distance_to_tss=494
 
|edg-2=
 
|edg-2=
 
|end=111036292
 
|end=111036292
Line 15: Line 15:
 
|entrez_id=1902
 
|entrez_id=1902
 
|gc_percent=0.422886
 
|gc_percent=0.422886
|gene_alias=EDG2
+
|gene_alias=EDG2{{!}}GPR26{{!}}Gpcr26{{!}}LPA1{{!}}Mrec1.3{{!}}VZG1{{!}}edg-2{{!}}rec.1.3{{!}}vzg-1
 
|gene_description=lysophosphatidic acid receptor 1
 
|gene_description=lysophosphatidic acid receptor 1
 
|gene_id=1902
 
|gene_id=1902
Line 21: Line 21:
 
|gene_source=HGNC:3166
 
|gene_source=HGNC:3166
 
|gene_symbol=LPAR1
 
|gene_symbol=LPAR1
|gene_synonyms=GPR26 Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
+
|gene_synonyms=Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:3166
 
|hgnc_mgi_id=HGNC:3166
 
|nearest_ensembl=ENSG00000198121
 
|nearest_ensembl=ENSG00000198121
|nearest_promoter_id=NM_001401
+
|nearest_promoter_id=NM_001351420
 
|nearest_refseq=NM_001401
 
|nearest_refseq=NM_001401
 
|nearest_unigene=Hs.126667
 
|nearest_unigene=Hs.126667
Line 34: Line 34:
 
|start_of_center_position=111036286
 
|start_of_center_position=111036286
 
|strand=-
 
|strand=-
|transcript_name=ENST00000541779.5 uc064vao.1 BC073167
+
|transcript_name=ENST00000541779.5 BC073167
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_101959.1
 
|tss_id=hg_101959.1

Revision as of 16:52, 15 June 2021

Basic information about the TSS


TSS ID:hg_101959.1
Species:human
Chr:chr9
TSS Classification:no
Start:111036280
End:111036292
Strand:-
TSS Score:1
Start of the center position in the TSS region:111036286
End of the center position in the TSS region:111036287



Gene and protein annotation


Transcript_name:ENST00000541779.5 BC073167
Distance:74
GeneID:1902
HGNC/MGI_ID:HGNC:3166
UniProt_ID:Q6GPG7
Gene_name:lysophosphatidic acid receptor 1
Gene_symbol:LPAR1
Gene_synonyms:Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
Gene_source:HGNC:3166



Transcript annotation


Transcript_name:ENST00000541779.5 BC073167
Distance:74
Num_trans:3
All_trans:ENST00000541779.5:74 BC073167:74 NM_001351420:-488



TATA-Box annotation


Distance to TSS:494
Nearest PromoterID:NM_001351420
Entrez ID:1902
Nearest Unigene:Hs.126667
Nearest Refseq:NM_001401
Nearest Ensembl:ENSG00000198121
Gene Name:lysophosphatidic acid receptor 1
Gene Alias:EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1
Gene Description:lysophosphatidic acid receptor 1
Gene Type:protein-coding
CpG%:0
GC%:0.422886
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):