Difference between revisions of "TSS:Hg 10196.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GLUT5= | |GLUT5= | ||
| − | |all_trans=ENST00000473209.1:-8 | + | |all_trans=ENST00000473209.1:-8 HM005394:9 AK294368:185 ENST00000377424.9:202 NM_003039:202 NM_001328621:202 NM_001328620:202 NM_001135585:202 AK290398:219 M55531:226 ENST00000377414.7:233 BC035878:233 AK295785:241 BC001692:250 BC001820:250 AK289849:253 AK300091:292 KJ892149:299 KJ892150:299 CU674838:299 DQ892291:300 DQ895491:300 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-8 | |distance=-8 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-205 |
|end=9069843 | |end=9069843 | ||
|end_of_center_position=9069840 | |end_of_center_position=9069840 | ||
|entrez_id=6518 | |entrez_id=6518 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=GLUT-5 | + | |gene_alias=GLUT-5{{!}}GLUT5 |
|gene_description=solute carrier family 2 member 5 | |gene_description=solute carrier family 2 member 5 | ||
|gene_id=6518 | |gene_id=6518 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:11010 | |hgnc_mgi_id=HGNC:11010 | ||
|nearest_ensembl=ENSG00000142583 | |nearest_ensembl=ENSG00000142583 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001135585 |
|nearest_refseq=NM_003039 | |nearest_refseq=NM_003039 | ||
|nearest_unigene=Hs.530003 | |nearest_unigene=Hs.530003 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=9069839 | |start_of_center_position=9069839 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000473209 | + | |transcript_name=ENST00000473209.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10196.1 | |tss_id=hg_10196.1 | ||
Revision as of 16:52, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9069839 |
|---|---|
| End of the center position in the TSS region: | 9069840 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000473209.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 22 |
| All_trans: | ENST00000473209.1:-8 HM005394:9 AK294368:185 ENST00000377424.9:202 NM_003039:202 NM_001328621:202 NM_001328620:202 NM_001135585:202 AK290398:219 M55531:226 ENST00000377414.7:233 BC035878:233 AK295785:241 BC001692:250 BC001820:250 AK289849:253 AK300091:292 KJ892149:299 KJ892150:299 CU674838:299 DQ892291:300 DQ895491:300 |
TATA-Box annotation
| Distance to TSS: | -205 |
|---|---|
| Nearest PromoterID: | NM_001135585 |
| Entrez ID: | 6518 |
| Nearest Unigene: | Hs.530003 |
| Nearest Refseq: | NM_003039 |
| Nearest Ensembl: | ENSG00000142583 |
| Gene Name: | solute carrier family 2 member 5 |
| Gene Alias: | GLUT-5|GLUT5 |
| Gene Description: | solute carrier family 2 member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
