Difference between revisions of "TSS:Hg 102025.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-139 | |distance=-139 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-193 |
|end=111631150 | |end=111631150 | ||
|end_of_center_position=111631142 | |end_of_center_position=111631142 | ||
| Line 12: | Line 12: | ||
|gene_description=DnaJ heat shock protein family (Hsp40) member C25 | |gene_description=DnaJ heat shock protein family (Hsp40) member C25 | ||
|gene_id=652972 | |gene_id=652972 | ||
| − | |gene_name= | + | |gene_name=leucine rich repeat containing 37 member A5, pseudogene |
|gene_source=HGNC:23369 | |gene_source=HGNC:23369 | ||
|gene_symbol=LRRC37A5P | |gene_symbol=LRRC37A5P | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23369 | |hgnc_mgi_id=HGNC:23369 | ||
|nearest_ensembl=ENSG00000059769 | |nearest_ensembl=ENSG00000059769 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001015882 |
|nearest_refseq=NM_001015882 | |nearest_refseq=NM_001015882 | ||
|nearest_unigene=Hs.534196 | |nearest_unigene=Hs.534196 | ||
Revision as of 16:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111631141 |
|---|---|
| End of the center position in the TSS region: | 111631142 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374304.1 BC040897 |
|---|---|
| Distance: | -139 |
| Num_trans: | 2 |
| All_trans: | ENST00000374304.1:-139 BC040897:-139 |
TATA-Box annotation
| Distance to TSS: | -193 |
|---|---|
| Nearest PromoterID: | NM_001015882 |
| Entrez ID: | 548645 |
| Nearest Unigene: | Hs.534196 |
| Nearest Refseq: | NM_001015882 |
| Nearest Ensembl: | ENSG00000059769 |
| Gene Name: | leucine rich repeat containing 37 member A5, pseudogene |
| Gene Alias: | bA16L21.2.1 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member C25 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
