Difference between revisions of "TSS:Hg 102053.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000374264.6 | + | |all_trans=ENST00000374264.6:0 AY358746:0 BC060770:0 ENST00000374270.8:-18 ENST00000374263.7:-18 NM_001282640:-18 NM_001282643:-18 NM_022486:-18 AK292868:-18 ENST00000355396.7:79 AK056704:79 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:25413 | |hgnc_mgi_id=HGNC:25413 | ||
|nearest_ensembl=ENSG00000106868 | |nearest_ensembl=ENSG00000106868 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282640 |
|nearest_refseq=NM_022486 | |nearest_refseq=NM_022486 | ||
|nearest_unigene=Hs.494827 | |nearest_unigene=Hs.494827 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=112175263 | |start=112175263 | ||
|start_of_center_position=112175271 | |start_of_center_position=112175271 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000374264.6 | + | |transcript_name=ENST00000374264.6 AY358746 BC060770 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102053.1 | |tss_id=hg_102053.1 | ||
Revision as of 16:54, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 112175271 |
|---|---|
| End of the center position in the TSS region: | 112175272 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374264.6 AY358746 BC060770 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000374264.6:0 AY358746:0 BC060770:0 ENST00000374270.8:-18 ENST00000374263.7:-18 NM_001282640:-18 NM_001282643:-18 NM_022486:-18 AK292868:-18 ENST00000355396.7:79 AK056704:79 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001282640 |
| Entrez ID: | 64420 |
| Nearest Unigene: | Hs.494827 |
| Nearest Refseq: | NM_022486 |
| Nearest Ensembl: | ENSG00000106868 |
| Gene Name: | sushi domain containing 1 |
| Gene Alias: | - |
| Gene Description: | sushi domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
