Difference between revisions of "TSS:Hg 102065.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=KJ902048:20 CU692212:20 ENST00000458258.5:-131 NM_001244898 | + | |all_trans=KJ902048:20 CU692212:20 ENST00000458258.5:-131 NM_001244898:-131 BC044585:-131 ENST00000210227.4:-134 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=147 | |distance_to_tss=147 | ||
|end=112332895 | |end=112332895 | ||
| + | |end_of_center_position=112332880 | ||
|entrez_id=9991 | |entrez_id=9991 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_005156 | |nearest_refseq=NM_005156 | ||
|nearest_unigene=Hs.269988 | |nearest_unigene=Hs.269988 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=112332863 | |start=112332863 | ||
| + | |start_of_center_position=112332879 | ||
|strand=- | |strand=- | ||
|transcript_name=KJ902048 CU692212 | |transcript_name=KJ902048 CU692212 | ||
Latest revision as of 16:54, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 112332879 |
|---|---|
| End of the center position in the TSS region: | 112332880 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ902048 CU692212 |
|---|---|
| Distance: | 20 |
| Num_trans: | 6 |
| All_trans: | KJ902048:20 CU692212:20 ENST00000458258.5:-131 NM_001244898:-131 BC044585:-131 ENST00000210227.4:-134 |
TATA-Box annotation
| Distance to TSS: | 147 |
|---|---|
| Nearest PromoterID: | NM_001244898 |
| Entrez ID: | 9991 |
| Nearest Unigene: | Hs.269988 |
| Nearest Refseq: | NM_005156 |
| Nearest Ensembl: | ENSG00000119314 |
| Gene Name: | PTBP3 |
| Gene Alias: | ROD1 |
| Gene Description: | polypyrimidine tract binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
