Difference between revisions of "TSS:Hg 102070.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-135 |entrez_id=84263 |gc_percent=0.651741 |gene_alias=C9orf99|SDR13C1 |gene_description=hydroxysteroid dehydrogenase like 2 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SDR13C1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=NA | ||
|distance_to_tss=-135 | |distance_to_tss=-135 | ||
| + | |end=112379781 | ||
| + | |end_of_center_position=112379774 | ||
|entrez_id=84263 | |entrez_id=84263 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=C9orf99 | + | |gene_alias=C9orf99{{!}}SDR13C1 |
|gene_description=hydroxysteroid dehydrogenase like 2 | |gene_description=hydroxysteroid dehydrogenase like 2 | ||
|gene_name=HSDL2 | |gene_name=HSDL2 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_032303 | |nearest_refseq=NM_032303 | ||
|nearest_unigene=Hs.59486 | |nearest_unigene=Hs.59486 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=112379766 | ||
| + | |start_of_center_position=112379773 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102070.1 | |tss_id=hg_102070.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:54, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 112379773 |
|---|---|
| End of the center position in the TSS region: | 112379774 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -135 |
|---|---|
| Nearest PromoterID: | NM_001195822 |
| Entrez ID: | 84263 |
| Nearest Unigene: | Hs.59486 |
| Nearest Refseq: | NM_032303 |
| Nearest Ensembl: | ENSG00000119471 |
| Gene Name: | HSDL2 |
| Gene Alias: | C9orf99|SDR13C1 |
| Gene Description: | hydroxysteroid dehydrogenase like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
