Difference between revisions of "TSS:Hg 102080.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001101338:0 AK095843:0 | + | |all_trans=ENST00000639196.1:0 NM_001101338:0 AK095843:0 ENST00000638622.1:-2 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:27271 | |hgnc_mgi_id=HGNC:27271 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000285447 |
|nearest_promoter_id=NM_001101338 | |nearest_promoter_id=NM_001101338 | ||
|nearest_refseq=NM_001101338 | |nearest_refseq=NM_001101338 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=113012199 | |start_of_center_position=113012199 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001101338 AK095843 | + | |transcript_name=ENST00000639196.1 NM_001101338 AK095843 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102080.1 | |tss_id=hg_102080.1 | ||
Revision as of 16:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113012199 |
|---|---|
| End of the center position in the TSS region: | 113012200 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000639196.1 NM_001101338 AK095843 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000639196.1:0 NM_001101338:0 AK095843:0 ENST00000638622.1:-2 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NM_001101338 |
| Entrez ID: | 169834 |
| Nearest Unigene: | Hs.192877 |
| Nearest Refseq: | NM_001101338 |
| Nearest Ensembl: | ENSG00000285447 |
| Gene Name: | zinc finger protein 883 |
| Gene Alias: | - |
| Gene Description: | zinc finger protein 883 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
