Difference between revisions of "TSS:Hg 102095.1"
From referenceTSS
| Line 2: | Line 2: | ||
|APC12= | |APC12= | ||
|C9orf17= | |C9orf17= | ||
| − | |all_trans=AK307507:-21 BC042534:-124 ENST00000490408.5:-129 | + | |all_trans=AK307507:-21 BC042534:-124 ENST00000490408.5:-129 ENST00000374206.4:-152 NM_139286:-152 BC066300:-152 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-21 | |distance=-21 | ||
| − | |distance_to_tss= | + | |distance_to_tss=163 |
|end=113275420 | |end=113275420 | ||
|end_of_center_position=113275410 | |end_of_center_position=113275410 | ||
|entrez_id=246184 | |entrez_id=246184 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=ANAPC12 | + | |gene_alias=ANAPC12{{!}}APC12{{!}}C9orf17 |
|gene_description=cell division cycle 26 | |gene_description=cell division cycle 26 | ||
|gene_id=23307 | |gene_id=23307 | ||
| − | |gene_name= | + | |gene_name=FKBP prolyl isomerase family member 15 |
|gene_source=HGNC:23397 | |gene_source=HGNC:23397 | ||
|gene_symbol=FKBP15 | |gene_symbol=FKBP15 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_139286 | |nearest_refseq=NM_139286 | ||
|nearest_unigene=Hs.727648 | |nearest_unigene=Hs.727648 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=113275398 | |start=113275398 | ||
|start_of_center_position=113275409 | |start_of_center_position=113275409 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=15(GGCTTGAAAAGA,-,0.00) |
|transcript_name=AK307507 | |transcript_name=AK307507 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 16:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113275409 |
|---|---|
| End of the center position in the TSS region: | 113275410 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK307507 |
|---|---|
| Distance: | -21 |
| Num_trans: | 6 |
| All_trans: | AK307507:-21 BC042534:-124 ENST00000490408.5:-129 ENST00000374206.4:-152 NM_139286:-152 BC066300:-152 |
TATA-Box annotation
| Distance to TSS: | 163 |
|---|---|
| Nearest PromoterID: | NM_139286 |
| Entrez ID: | 246184 |
| Nearest Unigene: | Hs.727648 |
| Nearest Refseq: | NM_139286 |
| Nearest Ensembl: | ENSG00000176386 |
| Gene Name: | FKBP prolyl isomerase family member 15 |
| Gene Alias: | ANAPC12|APC12|C9orf17 |
| Gene Description: | cell division cycle 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 15(GGCTTGAAAAGA,-,0.00) |
