Difference between revisions of "TSS:Hg 102107.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF226077:-17 AY720898:-17 JF432738:-17 KJ894010:-17 AB527738:-17 ENST00000479871 | + | |all_trans=AF226077:-17 AY720898:-17 JF432738:-17 KJ894010:-17 AB527738:-17 ENST00000479871.1:-67 AK092840:-67 ENST00000475080.1:-74 BC003166:-88 BC004170:-88 AK074782:-98 AK096050:-101 ENST00000374169.7:-106 AK074629:-106 AK074762:-396 ENST00000374171.5:-399 NR_027261:-399 NM_017443:-399 NM_001278255:-473 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-17 | |distance=-17 | ||
| − | |distance_to_tss= | + | |distance_to_tss=402 |
|end=113410276 | |end=113410276 | ||
|end_of_center_position=113410273 | |end_of_center_position=113410273 | ||
| − | |entrez_id= | + | |entrez_id=54107 |
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias= | + | |gene_alias=CHARAC17{{!}}CHRAC17{{!}}CHRAC2{{!}}YBL1{{!}}p17 |
| − | |gene_description= | + | |gene_description=DNA polymerase epsilon 3, accessory subunit |
|gene_id=54107 | |gene_id=54107 | ||
| − | |gene_name= | + | |gene_name=DNA polymerase epsilon 3, accessory subunit |
|gene_source=HGNC:13546 | |gene_source=HGNC:13546 | ||
|gene_symbol=POLE3 | |gene_symbol=POLE3 | ||
| − | |gene_synonyms=CHARAC17 CHRAC17 Ybl1 p17 | + | |gene_synonyms=CHARAC17 CHRAC17 CHRAC2 Ybl1 p17 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13546 | |hgnc_mgi_id=HGNC:13546 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000148229 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_027261 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_017443 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.108112 |
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=113410269 | |start=113410269 | ||
Revision as of 16:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410272 |
|---|---|
| End of the center position in the TSS region: | 113410273 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF226077 AY720898 JF432738 KJ894010 AB527738 |
|---|---|
| Distance: | -17 |
| Num_trans: | 19 |
| All_trans: | AF226077:-17 AY720898:-17 JF432738:-17 KJ894010:-17 AB527738:-17 ENST00000479871.1:-67 AK092840:-67 ENST00000475080.1:-74 BC003166:-88 BC004170:-88 AK074782:-98 AK096050:-101 ENST00000374169.7:-106 AK074629:-106 AK074762:-396 ENST00000374171.5:-399 NR_027261:-399 NM_017443:-399 NM_001278255:-473 |
TATA-Box annotation
| Distance to TSS: | 402 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | DNA polymerase epsilon 3, accessory subunit |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
