Difference between revisions of "TSS:Hg 102111.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CHRAC17= | |CHRAC17= | ||
|YBL1= | |YBL1= | ||
| − | |all_trans=ENST00000374171. | + | |all_trans=ENST00000374171.5:0 NR_027261:0 NM_017443:0 AK074762:0 NM_001278255:-67 ENST00000374169.7:285 AK074629:285 AK096050:290 AK074782:293 BC003166:303 BC004170:303 ENST00000475080.1:317 ENST00000479871.1:324 AK092840:324 AF226077:374 AY720898:374 JF432738:374 KJ894010:374 AB527738:374 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|entrez_id=54107 | |entrez_id=54107 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=CHARAC17 | + | |gene_alias=CHARAC17{{!}}CHRAC17{{!}}CHRAC2{{!}}YBL1{{!}}p17 |
| − | |gene_description= | + | |gene_description=DNA polymerase epsilon 3, accessory subunit |
|gene_id=54107 | |gene_id=54107 | ||
| − | |gene_name= | + | |gene_name=DNA polymerase epsilon 3, accessory subunit |
|gene_source=HGNC:13546 | |gene_source=HGNC:13546 | ||
|gene_symbol=POLE3 | |gene_symbol=POLE3 | ||
| − | |gene_synonyms=CHARAC17 CHRAC17 Ybl1 p17 | + | |gene_synonyms=CHARAC17 CHRAC17 CHRAC2 Ybl1 p17 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13546 | |hgnc_mgi_id=HGNC:13546 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_017443 | |nearest_refseq=NM_017443 | ||
|nearest_unigene=Hs.108112 | |nearest_unigene=Hs.108112 | ||
| − | |num_trans= | + | |num_trans=19 |
|p17= | |p17= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=113410674 | |start_of_center_position=113410674 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000374171. | + | |transcript_name=ENST00000374171.5 NR_027261 NM_017443 AK074762 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102111.1 | |tss_id=hg_102111.1 | ||
Revision as of 16:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410674 |
|---|---|
| End of the center position in the TSS region: | 113410675 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374171.5 NR_027261 NM_017443 AK074762 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000374171.5:0 NR_027261:0 NM_017443:0 AK074762:0 NM_001278255:-67 ENST00000374169.7:285 AK074629:285 AK096050:290 AK074782:293 BC003166:303 BC004170:303 ENST00000475080.1:317 ENST00000479871.1:324 AK092840:324 AF226077:374 AY720898:374 JF432738:374 KJ894010:374 AB527738:374 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | DNA polymerase epsilon 3, accessory subunit |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
