Difference between revisions of "TSS:Hg 102140.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=13129 |entrez_id=85301 |gc_percent=0.542289 |gene_alias=STLS |gene_description=collagen type XXVII alpha 1 chain |gene_name=COL2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=13137 | ||
| + | |end=114168675 | ||
| + | |end_of_center_position=114168674 | ||
|entrez_id=85301 | |entrez_id=85301 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_032161 | |nearest_refseq=NM_032161 | ||
|nearest_unigene=Hs.494892 | |nearest_unigene=Hs.494892 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=114168672 | ||
| + | |start_of_center_position=114168673 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102140.1 | |tss_id=hg_102140.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:56, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114168673 |
|---|---|
| End of the center position in the TSS region: | 114168674 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 13137 |
|---|---|
| Nearest PromoterID: | NM_032888 |
| Entrez ID: | 85301 |
| Nearest Unigene: | Hs.494892 |
| Nearest Refseq: | NM_032161 |
| Nearest Ensembl: | ENSG00000196739 |
| Gene Name: | COL27A1 |
| Gene Alias: | STLS |
| Gene Description: | collagen type XXVII alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
