Difference between revisions of "TSS:Hg 102156.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=2502 | ||
| + | |end=114385502 | ||
| + | |end_of_center_position=114385480 | ||
|entrez_id=80709 | |entrez_id=80709 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_030767 | |nearest_refseq=NM_030767 | ||
|nearest_unigene=Hs.494895 | |nearest_unigene=Hs.494895 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=114385457 | ||
| + | |start_of_center_position=114385479 | ||
| + | |strand=- | ||
| + | |tata_box=-41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102156.1 | |tss_id=hg_102156.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:56, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114385479 |
|---|---|
| End of the center position in the TSS region: | 114385480 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2502 |
|---|---|
| Nearest PromoterID: | NM_001317950 |
| Entrez ID: | 80709 |
| Nearest Unigene: | Hs.494895 |
| Nearest Refseq: | NM_030767 |
| Nearest Ensembl: | ENSG00000106948 |
| Gene Name: | AKNA |
| Gene Alias: | - |
| Gene Description: | AT-hook transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00) |
