Difference between revisions of "TSS:Hg 102177.1"
From referenceTSS
| Line 4: | Line 4: | ||
|VEGI= | |VEGI= | ||
|VEGI192A= | |VEGI192A= | ||
| − | |all_trans=AK291642:0 BC074940:-4 BC074941:-4 AB590753:19 BC069435:-35 AK313721:-55 | + | |all_trans=ENST00000374045.5:0 NM_005118:0 AK291642:0 BC074940:-4 BC074941:-4 AB590753:19 BC069435:-35 AK313721:-55 BC104462:-79 BC104463:-80 AF520785:-84 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=114806048 | |end=114806048 | ||
|end_of_center_position=114806040 | |end_of_center_position=114806040 | ||
|entrez_id=9966 | |entrez_id=9966 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=TL1 | + | |gene_alias=TL1{{!}}TL1A{{!}}TNLG1B{{!}}VEGI{{!}}VEGI192A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 15 |
|gene_id=9966 | |gene_id=9966 | ||
| − | |gene_name= | + | |gene_name=TNF superfamily member 15 |
|gene_source=HGNC:11931 | |gene_source=HGNC:11931 | ||
|gene_symbol=TNFSF15 | |gene_symbol=TNFSF15 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005118 | |nearest_refseq=NM_005118 | ||
|nearest_unigene=Hs.23349 | |nearest_unigene=Hs.23349 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=114806031 | |start=114806031 | ||
|start_of_center_position=114806039 | |start_of_center_position=114806039 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK291642 | + | |transcript_name=ENST00000374045.5 NM_005118 AK291642 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102177.1 | |tss_id=hg_102177.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0U5JA19 O95150 |
}} | }} | ||
Revision as of 16:57, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114806039 |
|---|---|
| End of the center position in the TSS region: | 114806040 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374045.5 NM_005118 AK291642 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000374045.5:0 NM_005118:0 AK291642:0 BC074940:-4 BC074941:-4 AB590753:19 BC069435:-35 AK313721:-55 BC104462:-79 BC104463:-80 AF520785:-84 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_005118 |
| Entrez ID: | 9966 |
| Nearest Unigene: | Hs.23349 |
| Nearest Refseq: | NM_005118 |
| Nearest Ensembl: | ENSG00000181634 |
| Gene Name: | TNF superfamily member 15 |
| Gene Alias: | TL1|TL1A|TNLG1B|VEGI|VEGI192A |
| Gene Description: | TNF superfamily member 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
