Difference between revisions of "TSS:Hg 102238.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EST-YD1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=80627 | ||
| + | |end=115844585 | ||
| + | |end_of_center_position=115844581 | ||
|entrez_id=58483 | |entrez_id=58483 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=C9orf27 | + | |gene_alias=C9orf27{{!}}EST-YD1 |
|gene_description=long intergenic non-protein coding RNA 474 | |gene_description=long intergenic non-protein coding RNA 474 | ||
|gene_name=LINC00474 | |gene_name=LINC00474 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000204148 |
|nearest_promoter_id=NR_024032 | |nearest_promoter_id=NR_024032 | ||
| − | |nearest_refseq= | + | |nearest_refseq=NR_024032 |
|nearest_unigene=Hs.23367 | |nearest_unigene=Hs.23367 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=115844575 | ||
| + | |start_of_center_position=115844580 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102238.1 | |tss_id=hg_102238.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115844580 |
|---|---|
| End of the center position in the TSS region: | 115844581 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 80627 |
|---|---|
| Nearest PromoterID: | NR_024032 |
| Entrez ID: | 58483 |
| Nearest Unigene: | Hs.23367 |
| Nearest Refseq: | NR_024032 |
| Nearest Ensembl: | ENSG00000204148 |
| Gene Name: | LINC00474 |
| Gene Alias: | C9orf27|EST-YD1 |
| Gene Description: | long intergenic non-protein coding RNA 474 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
