Difference between revisions of "TSS:Hg 102246.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-354 |entrez_id=5069 |gc_percent=0.422886 |gene_alias=ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 |gene_description=pappalysin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DIPLA1= | ||
| + | |IGFBP-4ase= | ||
| + | |PAPA= | ||
| + | |PAPP-A= | ||
| + | |PAPPA1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-353 | ||
| + | |end=116153440 | ||
| + | |end_of_center_position=116153439 | ||
|entrez_id=5069 | |entrez_id=5069 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=ASBABP2 | + | |gene_alias=ASBABP2{{!}}DIPLA1{{!}}IGFBP-4ase{{!}}PAPA{{!}}PAPP-A{{!}}PAPPA1 |
|gene_description=pappalysin 1 | |gene_description=pappalysin 1 | ||
|gene_name=PAPPA | |gene_name=PAPPA | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_002581 | |nearest_refseq=NM_002581 | ||
|nearest_unigene=Hs.643599 | |nearest_unigene=Hs.643599 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=116153436 | ||
| + | |start_of_center_position=116153438 | ||
| + | |strand=- | ||
| + | |tata_box=-7(TTTTTTAAGGAG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102246.1 | |tss_id=hg_102246.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:59, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 116153438 |
|---|---|
| End of the center position in the TSS region: | 116153439 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -353 |
|---|---|
| Nearest PromoterID: | NM_002581 |
| Entrez ID: | 5069 |
| Nearest Unigene: | Hs.643599 |
| Nearest Refseq: | NM_002581 |
| Nearest Ensembl: | ENSG00000182752 |
| Gene Name: | PAPPA |
| Gene Alias: | ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 |
| Gene Description: | pappalysin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(TTTTTTAAGGAG,+,0.00) |
