Difference between revisions of "TSS:Hg 102251.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000288520.9:0 ENST00000341734.8:0 ENST00000358637.4:0 NM_198188:0 NM_198187:0 | + | |all_trans=ENST00000288520.9:0 ENST00000341734.8:0 ENST00000358637.4:0 NM_198188:0 NM_198187:0 NM_198186:0 NM_001184734:0 NM_001184735:0 BC029272:0 AK024064:0 BC010680:0 BC093835:108 BC143289:108 BC143293:108 BC143292:108 BC101667:109 KJ898468:400 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=116687204 | |start=116687204 | ||
|start_of_center_position=116687237 | |start_of_center_position=116687237 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 NM_198188 NM_198187 NM_001184734 | + | |transcript_name=ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 NM_198188 NM_198187 NM_198186 NM_001184734 NM_001184735 BC029272 AK024064 BC010680 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102251.1 | |tss_id=hg_102251.1 | ||
Revision as of 16:59, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116687237 |
|---|---|
| End of the center position in the TSS region: | 116687238 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 NM_198188 NM_198187 NM_198186 NM_001184734 NM_001184735 BC029272 AK024064 BC010680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000288520.9:0 ENST00000341734.8:0 ENST00000358637.4:0 NM_198188:0 NM_198187:0 NM_198186:0 NM_001184734:0 NM_001184735:0 BC029272:0 AK024064:0 BC010680:0 BC093835:108 BC143289:108 BC143293:108 BC143292:108 BC101667:109 KJ898468:400 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_198186 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
