Difference between revisions of "TSS:Hg 102256.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB383928:26 | + | |all_trans=AB383928:26 ENST00000361477.8:-66 AB014534:-66 BC146756:-66 BX649176:-80 ENST00000313400.9:-84 NM_001365069:-84 NM_001365068:-84 NM_014010:-84 ENST00000361209.6:-97 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=26 | |distance=26 | ||
| − | |distance_to_tss= | + | |distance_to_tss=88 |
|end=117414973 | |end=117414973 | ||
|end_of_center_position=117414970 | |end_of_center_position=117414970 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17021 | |hgnc_mgi_id=HGNC:17021 | ||
|nearest_ensembl=ENSG00000148219 | |nearest_ensembl=ENSG00000148219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001365069 |
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=117414965 | |start=117414965 | ||
Revision as of 16:59, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117414969 |
|---|---|
| End of the center position in the TSS region: | 117414970 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB383928 |
|---|---|
| Distance: | 26 |
| Num_trans: | 10 |
| All_trans: | AB383928:26 ENST00000361477.8:-66 AB014534:-66 BC146756:-66 BX649176:-80 ENST00000313400.9:-84 NM_001365069:-84 NM_001365068:-84 NM_014010:-84 ENST00000361209.6:-97 |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_001365069 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
