Difference between revisions of "TSS:Hg 102267.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DBCCR1= | |DBCCR1= | ||
|FAM5A= | |FAM5A= | ||
| + | |all_trans=ENST00000670605.1:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=53083 |
|end=118732772 | |end=118732772 | ||
|end_of_center_position=118732755 | |end_of_center_position=118732755 | ||
| − | |entrez_id= | + | |entrez_id=111216287 |
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2578 |
| − | |gene_name= | + | |gene_id=102724929 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC102724929 |
| − | |nearest_ensembl= | + | |gene_source=EntrezGene:102724929 |
| − | |nearest_promoter_id= | + | |gene_symbol=LOC102724929 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene= | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id= |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_151725 | ||
| + | |nearest_refseq=NR_151725 | ||
| + | |nearest_unigene= | ||
| + | |num_trans=1 | ||
|species=human | |species=human | ||
|start=118732736 | |start=118732736 | ||
|start_of_center_position=118732754 | |start_of_center_position=118732754 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-61(CACTTTATGAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000670605.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102267.1 | |tss_id=hg_102267.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118732754 |
|---|---|
| End of the center position in the TSS region: | 118732755 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000670605.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENST00000670605.1:0 |
TATA-Box annotation
| Distance to TSS: | 53083 |
|---|---|
| Nearest PromoterID: | NR_151725 |
| Entrez ID: | 111216287 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_151725 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC102724929 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2578 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -61(CACTTTATGAGG,-,0.00) |
