Difference between revisions of "TSS:Hg 102269.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DBCCR1= | |DBCCR1= | ||
|FAM5A= | |FAM5A= | ||
| − | |all_trans=BC065196:-12 AF027734:-21 ENST00000373964.2 | + | |all_trans=BC065196:-12 AF027734:-21 ENST00000373964.2:-23 BC021560:-23 ENST00000265922.8:-33 NM_014618:-33 AK293649:-33 BC071702:92 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=-12 | |distance=-12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=37 |
|end=119369402 | |end=119369402 | ||
|end_of_center_position=119369398 | |end_of_center_position=119369398 | ||
|entrez_id=1620 | |entrez_id=1620 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=DBC1 | + | |gene_alias=DBC1{{!}}DBCCR1{{!}}FAM5A |
|gene_description=BMP/retinoic acid inducible neural specific 1 | |gene_description=BMP/retinoic acid inducible neural specific 1 | ||
|gene_id=1620 | |gene_id=1620 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_014618 | |nearest_refseq=NM_014618 | ||
|nearest_unigene=Hs.532316 | |nearest_unigene=Hs.532316 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=119369393 | |start=119369393 | ||
Revision as of 16:59, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119369397 |
|---|---|
| End of the center position in the TSS region: | 119369398 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC065196 |
|---|---|
| Distance: | -12 |
| Num_trans: | 8 |
| All_trans: | BC065196:-12 AF027734:-21 ENST00000373964.2:-23 BC021560:-23 ENST00000265922.8:-33 NM_014618:-33 AK293649:-33 BC071702:92 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_014618 |
| Entrez ID: | 1620 |
| Nearest Unigene: | Hs.532316 |
| Nearest Refseq: | NM_014618 |
| Nearest Ensembl: | ENSG00000078725 |
| Gene Name: | BMP/retinoic acid inducible neural specific 1 |
| Gene Alias: | DBC1|DBCCR1|FAM5A |
| Gene Description: | BMP/retinoic acid inducible neural specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
